STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g3058Aminotran_5 domain-containing protein. (388 aa)    
Predicted Functional Partners:
EVG20_g11452
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.931
EVG20_g2903
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.928
EVG20_g7982
Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
  
 
 0.926
EVG20_g1839
Isocitrate lyase.
  
 
 0.926
EVG20_g6767
Uncharacterized protein.
   
 
 0.922
EVG20_g6533
Malate synthase; Belongs to the malate synthase family.
  
 
 0.920
EVG20_g368
Beta_elim_lyase domain-containing protein.
    
 0.917
EVG20_g9677
Uncharacterized protein.
  
 
 0.912
EVG20_g2462
Methyltransf_11 domain-containing protein.
   
 
 0.905
EVG20_g1259
PALP domain-containing protein.
  
 0.904
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.