EVG20_g1049 protein (Dentipellis fragilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EVG20_g1049

Uncharacterized protein. (650 aa)

Predicted Functional Partners:

EVG20_g230

0.925

EVG20_g3239

0.895

EVG20_g7091

0.755

EVG20_g3545

0.755

EVG20_g4682

0.720

EVG20_g4255

0.720

EVG20_g4952

0.682

EVG20_g10699

0.641

EVG20_g919

0.641

EVG20_g8532

0.620

Your Current Organism:

Dentipellis fragilis

NCBI taxonomy Id: 205917
Other names: D. fragilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EVG20_g1049	EVG20_g10699	A0A4Y9ZBL9	A0A4Y9XQR7	Uncharacterized protein.	SH3 domain-containing protein.	0.641
EVG20_g1049	EVG20_g230	A0A4Y9ZBL9	A0A4Y9ZFK9	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.925
EVG20_g1049	EVG20_g3239	A0A4Y9ZBL9	A0A4Y9Z5B0	Uncharacterized protein.	Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.	0.895
EVG20_g1049	EVG20_g3545	A0A4Y9ZBL9	A0A4Y9Z1S9	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.755
EVG20_g1049	EVG20_g4255	A0A4Y9ZBL9	A0A4Y9YYK0	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.720
EVG20_g1049	EVG20_g4682	A0A4Y9ZBL9	A0A4Y9YUZ8	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.720
EVG20_g1049	EVG20_g4952	A0A4Y9ZBL9	A0A4Y9YU89	Uncharacterized protein.	Uncharacterized protein.	0.682
EVG20_g1049	EVG20_g7091	A0A4Y9ZBL9	A0A4Y9YGV8	Uncharacterized protein.	Uncharacterized protein.	0.755
EVG20_g1049	EVG20_g8532	A0A4Y9ZBL9	A0A4Y9Y4Q7	Uncharacterized protein.	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.620
EVG20_g1049	EVG20_g919	A0A4Y9ZBL9	A0A4Y9ZB55	Uncharacterized protein.	Pex2_Pex12 domain-containing protein.	0.641
EVG20_g10699	EVG20_g1049	A0A4Y9XQR7	A0A4Y9ZBL9	SH3 domain-containing protein.	Uncharacterized protein.	0.641
EVG20_g10699	EVG20_g8532	A0A4Y9XQR7	A0A4Y9Y4Q7	SH3 domain-containing protein.	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.705
EVG20_g10699	EVG20_g919	A0A4Y9XQR7	A0A4Y9ZB55	SH3 domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.957
EVG20_g230	EVG20_g1049	A0A4Y9ZFK9	A0A4Y9ZBL9	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.925
EVG20_g230	EVG20_g4952	A0A4Y9ZFK9	A0A4Y9YU89	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.691
EVG20_g3239	EVG20_g1049	A0A4Y9Z5B0	A0A4Y9ZBL9	Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.	Uncharacterized protein.	0.895
EVG20_g3239	EVG20_g3545	A0A4Y9Z5B0	A0A4Y9Z1S9	Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.683
EVG20_g3239	EVG20_g7091	A0A4Y9Z5B0	A0A4Y9YGV8	Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.	Uncharacterized protein.	0.683
EVG20_g3545	EVG20_g1049	A0A4Y9Z1S9	A0A4Y9ZBL9	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein.	0.755
EVG20_g3545	EVG20_g3239	A0A4Y9Z1S9	A0A4Y9Z5B0	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.	0.683