STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g710Uncharacterized protein. (795 aa)    
Predicted Functional Partners:
EVG20_g6438
Uncharacterized protein.
   
 
 0.998
EVG20_g1958
Uncharacterized protein.
   
 
 0.998
EVG20_g7442
ENDO3c domain-containing protein.
   
 
 0.997
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.997
EVG20_g6903
KH domain-containing protein.
   
 
 0.996
EVG20_g3673
WD_REPEATS_REGION domain-containing protein.
   
 
 0.996
EVG20_g2672
Bms1-type G domain-containing protein.
   
 
 0.996
EVG20_g770
WD_REPEATS_REGION domain-containing protein.
   
 
 0.996
EVG20_g442
WD_REPEATS_REGION domain-containing protein.
   
   0.996
EVG20_g670
Uncharacterized protein.
   
 
 0.996
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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