STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1495Copper resistance protein CopC. (126 aa)    
Predicted Functional Partners:
Psyr_1496
Copper resistance D.
 
  
 0.969
Psyr_1494
Copper resistance B precursor.
 
   
 0.771
Psyr_1493
Twin-arginine translocation pathway signal:Copper-resistance protein CopA.
 
   
 0.729
Psyr_3369
Twin-arginine translocation pathway signal:Tat-translocated enzyme:Dyp-type peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
  
 0.678
Psyr_2286
Protein of unknown function DUF461.
  
    0.638
Psyr_4422
Protein of unknown function DUF461.
  
    0.638
Psyr_1498
Heavy metal sensor kinase; Member of a two-component regulatory system.
  
  
 0.620
Psyr_1497
Heavy metal response regulator.
  
  
 0.609
Psyr_3416
Cytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 
 0.540
Psyr_2371
L-arabinose-binding protein.
  
     0.533
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.