STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1631ABC-2. (262 aa)    
Predicted Functional Partners:
Psyr_1630
ABC transporter.
  
 0.987
Psyr_1629
Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal; Belongs to the GST superfamily.
 
     0.605
Psyr_1632
ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2.
       0.594
Psyr_1794
Amino acid adenylation.
  
  
 0.565
Psyr_1792
Amino acid adenylation.
  
  
 0.559
Psyr_3405
Abortive infection protein.
  
  
 0.541
macB1
ABC transporter:Protein of unknown function DUF214; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
     
 0.528
macB2
ABC transporter:Protein of unknown function DUF214; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
     
 0.528
Psyr_1705
Amino acid adenylation.
  
  
 0.522
Psyr_3592
Nitroreductase.
  
  
 0.496
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.