Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_1714 | Psyr_1716 | Psyr_1714 | Psyr_1716 | Exonuclease SbcC. | Conserved hypothetical protein. | 0.675 |
Psyr_1714 | Psyr_1717 | Psyr_1714 | Psyr_1717 | Exonuclease SbcC. | TPR repeat:von Willebrand factor, type A. | 0.694 |
Psyr_1714 | Psyr_1718 | Psyr_1714 | Psyr_1718 | Exonuclease SbcC. | Von Willebrand factor, type A. | 0.675 |
Psyr_1714 | Psyr_1719 | Psyr_1714 | Psyr_1719 | Exonuclease SbcC. | Conserved hypothetical protein. | 0.675 |
Psyr_1714 | Psyr_1720 | Psyr_1714 | Psyr_1720 | Exonuclease SbcC. | Protein of unknown function DUF58. | 0.675 |
Psyr_1714 | Psyr_1721 | Psyr_1714 | Psyr_1721 | Exonuclease SbcC. | moxR protein, putative. | 0.671 |
Psyr_1714 | sbcD | Psyr_1714 | Psyr_1715 | Exonuclease SbcC. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.998 |
Psyr_1716 | Psyr_1714 | Psyr_1716 | Psyr_1714 | Conserved hypothetical protein. | Exonuclease SbcC. | 0.675 |
Psyr_1716 | Psyr_1717 | Psyr_1716 | Psyr_1717 | Conserved hypothetical protein. | TPR repeat:von Willebrand factor, type A. | 0.969 |
Psyr_1716 | Psyr_1718 | Psyr_1716 | Psyr_1718 | Conserved hypothetical protein. | Von Willebrand factor, type A. | 0.953 |
Psyr_1716 | Psyr_1719 | Psyr_1716 | Psyr_1719 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.950 |
Psyr_1716 | Psyr_1720 | Psyr_1716 | Psyr_1720 | Conserved hypothetical protein. | Protein of unknown function DUF58. | 0.967 |
Psyr_1716 | Psyr_1721 | Psyr_1716 | Psyr_1721 | Conserved hypothetical protein. | moxR protein, putative. | 0.911 |
Psyr_1716 | sbcD | Psyr_1716 | Psyr_1715 | Conserved hypothetical protein. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.675 |
Psyr_1717 | Psyr_1714 | Psyr_1717 | Psyr_1714 | TPR repeat:von Willebrand factor, type A. | Exonuclease SbcC. | 0.694 |
Psyr_1717 | Psyr_1716 | Psyr_1717 | Psyr_1716 | TPR repeat:von Willebrand factor, type A. | Conserved hypothetical protein. | 0.969 |
Psyr_1717 | Psyr_1718 | Psyr_1717 | Psyr_1718 | TPR repeat:von Willebrand factor, type A. | Von Willebrand factor, type A. | 0.956 |
Psyr_1717 | Psyr_1719 | Psyr_1717 | Psyr_1719 | TPR repeat:von Willebrand factor, type A. | Conserved hypothetical protein. | 0.940 |
Psyr_1717 | Psyr_1720 | Psyr_1717 | Psyr_1720 | TPR repeat:von Willebrand factor, type A. | Protein of unknown function DUF58. | 0.966 |
Psyr_1717 | Psyr_1721 | Psyr_1717 | Psyr_1721 | TPR repeat:von Willebrand factor, type A. | moxR protein, putative. | 0.938 |
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