STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2068Arylesterase. (205 aa)    
Predicted Functional Partners:
Psyr_2066
Protein of unknown function DUF214:Fimbrial assembly.
 
     0.908
Psyr_2067
ABC transporter.
 
     0.843
Psyr_2069
Conserved hypothetical protein.
       0.634
Psyr_1794
Amino acid adenylation.
  
  
 0.628
Psyr_2070
ErfK/YbiS/YcfS/YnhG.
     
 0.521
Psyr_1184
Type III helper protein HrpW1.
  
 
 0.503
Psyr_0852
Pectate lyase.
  
 
 0.464
cysG
uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
     
 0.436
Psyr_4755
Hydrolase, alpha/beta fold family.
 
   
 0.426
Psyr_0054
Alginate regulatory protein AlgR3.
  
 
 0.425
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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