STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2187General substrate transporter:Major facilitator superfamily. (440 aa)    
Predicted Functional Partners:
Psyr_1990
D-galactonate transporter.
  
     0.709
Psyr_2715
Major facilitator superfamily.
  
     0.677
Psyr_3119
Major facilitator superfamily.
  
     0.666
Psyr_3501
General substrate transporter:Major facilitator superfamily.
  
     0.657
Psyr_1709
Major facilitator superfamily.
  
     0.647
Psyr_2129
Major facilitator superfamily.
  
     0.632
Psyr_2186
Senescence marker protein-30 (SMP-30).
 
     0.604
Psyr_2304
General substrate transporter:Major facilitator superfamily.
  
     0.572
Psyr_2185
Prokaryotic protein of unknown function DUF849.
       0.453
Psyr_4488
L-fucose permease.
  
  
 0.425
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.