STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2465Acyltransferase 3. (340 aa)    
Predicted Functional Partners:
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
      
 0.675
NdpA
37kDa nucleoid-associated bacterial protein.
      
 0.670
Psyr_2359
Conserved hypothetical protein.
  
     0.642
Psyr_0511
Conserved hypothetical protein.
  
     0.606
nfuA
HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
       0.590
Psyr_1276
Conserved hypothetical protein.
  
     0.497
Psyr_1396
DUF2156 domain-containing protein; Protein of unknown function DUF470:Protein of unknown function DUF471:Protein of unknown function DUF472.
 
   
 0.479
Psyr_4334
Conserved hypothetical protein.
  
     0.465
Psyr_0640
Lipoprotein, putative.
  
     0.451
Psyr_3945
Secreted protein-like protein.
 
  
 0.430
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.