STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2531Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
Psyr_2532
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
    
0.779
Psyr_2268
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.754
Psyr_2938
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.752
Psyr_3397
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.748
Psyr_1928
Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
  
     0.735
Psyr_2713
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.733
Psyr_1800
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.725
Psyr_2480
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.723
Psyr_2180
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.721
Psyr_3600
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.714
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.