STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2610Chlorinating enzyme. (310 aa)    
Predicted Functional Partners:
Psyr_2611
Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.747
Psyr_4805
YD repeat protein.
  
     0.696
Psyr_4986
YD repeat protein.
  
     0.690
Psyr_1794
Amino acid adenylation.
  
  
 0.689
Psyr_4997
YD repeat protein.
  
     0.659
Psyr_4994
Rhs-related protein.
  
     0.637
Psyr_2609
Alpha/beta hydrolase fold protein.
  
  
 0.623
Psyr_4990
YD repeat protein.
  
     0.621
Psyr_1705
Amino acid adenylation.
  
 
 0.609
Psyr_4988
YD repeat protein.
  
     0.601
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.