STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2611Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family. (614 aa)    
Predicted Functional Partners:
Psyr_4313
Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein.
 
 0.971
Psyr_1794
Amino acid adenylation.
 
 
0.964
Psyr_4312
Erythronolide synthase.
 
 0.955
Psyr_4314
Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein.
 
 0.945
Psyr_0194
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      0.900
Psyr_1947
MbtH-like protein.
 
 
 0.899
Psyr_0602
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      0.897
Psyr_2612
syrP protein, putative.
  
 0.842
Psyr_1944
Thioesterase.
  
 0.819
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
  
 
 0.802
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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