Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psyr_0764 | Psyr_2235 | Gluconolactonase. | Gluconolactonase. | 0.922 |
Psyr_0764 | Psyr_2716 | Gluconolactonase. | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | 0.588 |
Psyr_0764 | Psyr_3120 | Gluconolactonase. | D-glucarate dehydratase. | 0.413 |
Psyr_0764 | Psyr_4225 | Gluconolactonase. | Galactarate dehydratase. | 0.462 |
Psyr_0764 | Psyr_4227 | Gluconolactonase. | Dihydrodipicolinate synthetase; Belongs to the DapA family. | 0.416 |
Psyr_2235 | Psyr_0764 | Gluconolactonase. | Gluconolactonase. | 0.922 |
Psyr_2235 | Psyr_2716 | Gluconolactonase. | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | 0.510 |
Psyr_2235 | Psyr_3120 | Gluconolactonase. | D-glucarate dehydratase. | 0.448 |
Psyr_2235 | Psyr_4225 | Gluconolactonase. | Galactarate dehydratase. | 0.539 |
Psyr_2235 | Psyr_4227 | Gluconolactonase. | Dihydrodipicolinate synthetase; Belongs to the DapA family. | 0.593 |
Psyr_2588 | Psyr_2716 | HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | 0.518 |
Psyr_2588 | Psyr_3120 | HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. | D-glucarate dehydratase. | 0.452 |
Psyr_2588 | Psyr_4225 | HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. | Galactarate dehydratase. | 0.475 |
Psyr_2715 | Psyr_2716 | Major facilitator superfamily. | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | 0.728 |
Psyr_2716 | Psyr_0764 | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | Gluconolactonase. | 0.588 |
Psyr_2716 | Psyr_2235 | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | Gluconolactonase. | 0.510 |
Psyr_2716 | Psyr_2588 | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.518 |
Psyr_2716 | Psyr_2715 | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | Major facilitator superfamily. | 0.728 |
Psyr_2716 | Psyr_3120 | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | D-glucarate dehydratase. | 0.917 |
Psyr_2716 | Psyr_3402 | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme. | Aldehyde dehydrogenase. | 0.901 |
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