STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3506Sulfatase. (677 aa)    
Predicted Functional Partners:
Psyr_3508
Glycosyl hydrolase, BNR repeat protein.
 
     0.931
Psyr_3507
Membrane protein, putative.
       0.788
Psyr_3509
Cytochrome B561, bacterial.
       0.667
Psyr_3510
Conserved hypothetical protein.
       0.655
Psyr_3512
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal.
 
     0.543
Psyr_3505
Heme oxygenase.
 
     0.525
Psyr_4304
Endonuclease/exonuclease/phosphatase.
  
     0.513
Psyr_3092
PAP2 superfamily protein.
 
     0.497
Psyr_3017
Conserved hypothetical protein.
  
     0.482
Psyr_3504
GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.
 
     0.480
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (14%) [HD]