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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0010Hypothetical protein; Identified by Glimmer2; putative. (339 aa)    
Predicted Functional Partners:
ECH_0009
Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.
       0.661
ECH_0008
Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.
       0.570
ECH_0697
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.560
ECH_0836
Conserved hypothetical protein; Identified by similarity to GB:AAS14108.1.
      
 0.560
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by similarity to SP:O34425; match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.511
ECH_0175
Malate dehydrogenase; Identified by similarity to SP:O30808; match to protein family HMM PF00390; match to protein family HMM PF01515; match to protein family HMM PF03949.
      
 0.497
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
      
 0.497
ECH_0734
Antioxidant, AhpC/Tsa family; Identified by match to protein family HMM PF00578.
      
 0.497
atpX
ATP synthase F0, B' subunit; Identified by similarity to SP:P15015; match to protein family HMM PF00430; Belongs to the ATPase B chain family.
      
 0.497
ECH_0332
HAD-superfamily hydrolase, subfamily IA, variant 1; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549.
      
 0.479
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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