STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0085ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (238 aa)    
Predicted Functional Partners:
ECH_0084
Conserved hypothetical protein; Identified by similarity to GB:AAS14650.1; match to protein family HMM PF02405.
 0.999
ECH_0183
Identified by match to protein family HMM PF02470.
 
 0.995
ECH_0069
Conserved hypothetical protein; Identified by similarity to GB:AAK25655.1.
  
 
 0.902
ECH_0313
ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
    
0.656
ECH_0087
Hypothetical protein; Identified by Glimmer2; putative.
       0.634
ECH_0383
Type I secretion system ATPase; Identified by similarity to GB:AAD09853.1; match to protein family HMM PF00005; match to protein family HMM TIGR01842.
 
    
0.562
nuoA
NADH dehydrogenase I, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
    0.505
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.