Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ECH_0057 | ECH_0129 | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | HemY domain protein. | 0.735 |
ECH_0057 | ECH_0176 | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | Conserved hypothetical protein; Identified by similarity to GB:AAS14671.1. | 0.763 |
ECH_0057 | ECH_0264 | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | Conserved hypothetical protein; Identified by similarity to GB:AAS14039.1. | 0.749 |
ECH_0057 | ECH_0343 | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | Conserved hypothetical protein; Identified by similarity to PIR:F97652. | 0.526 |
ECH_0057 | ECH_0731 | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | Rotamase family protein; Identified by similarity to SP:P77241; match to protein family HMM PF00639. | 0.508 |
ECH_0057 | ECH_0820 | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | Conserved hypothetical protein; Identified by similarity to GB:AAS14586.1. | 0.579 |
ECH_0127 | ECH_0128 | Lipoprotein releasing system transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212. | Putative lipoprotein. | 0.798 |
ECH_0127 | ECH_0129 | Lipoprotein releasing system transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212. | HemY domain protein. | 0.802 |
ECH_0127 | ECH_0130 | Lipoprotein releasing system transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212. | Conserved hypothetical protein; Identified by similarity to GB:BAC50165.1. | 0.772 |
ECH_0128 | ECH_0127 | Putative lipoprotein. | Lipoprotein releasing system transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212. | 0.798 |
ECH_0128 | ECH_0129 | Putative lipoprotein. | HemY domain protein. | 0.832 |
ECH_0128 | ECH_0130 | Putative lipoprotein. | Conserved hypothetical protein; Identified by similarity to GB:BAC50165.1. | 0.832 |
ECH_0129 | ECH_0057 | HemY domain protein. | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | 0.735 |
ECH_0129 | ECH_0127 | HemY domain protein. | Lipoprotein releasing system transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212. | 0.802 |
ECH_0129 | ECH_0128 | HemY domain protein. | Putative lipoprotein. | 0.832 |
ECH_0129 | ECH_0130 | HemY domain protein. | Conserved hypothetical protein; Identified by similarity to GB:BAC50165.1. | 0.832 |
ECH_0129 | ECH_0176 | HemY domain protein. | Conserved hypothetical protein; Identified by similarity to GB:AAS14671.1. | 0.746 |
ECH_0129 | ECH_0264 | HemY domain protein. | Conserved hypothetical protein; Identified by similarity to GB:AAS14039.1. | 0.764 |
ECH_0129 | ECH_0343 | HemY domain protein. | Conserved hypothetical protein; Identified by similarity to PIR:F97652. | 0.691 |
ECH_0129 | ECH_0731 | HemY domain protein. | Rotamase family protein; Identified by similarity to SP:P77241; match to protein family HMM PF00639. | 0.698 |
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