STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0129HemY domain protein. (416 aa)    
Predicted Functional Partners:
ECH_0128
Putative lipoprotein.
       0.832
ECH_0130
Conserved hypothetical protein; Identified by similarity to GB:BAC50165.1.
       0.832
ECH_0127
Lipoprotein releasing system transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212.
  
    0.802
ECH_0264
Conserved hypothetical protein; Identified by similarity to GB:AAS14039.1.
  
     0.764
ECH_0820
Conserved hypothetical protein; Identified by similarity to GB:AAS14586.1.
  
     0.761
ECH_0176
Conserved hypothetical protein; Identified by similarity to GB:AAS14671.1.
  
     0.746
ECH_0057
Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098.
  
     0.735
ECH_0731
Rotamase family protein; Identified by similarity to SP:P77241; match to protein family HMM PF00639.
  
     0.698
ECH_0343
Conserved hypothetical protein; Identified by similarity to PIR:F97652.
  
     0.691
ECH_0907
Conserved hypothetical protein; Identified by similarity to GB:AAS14420.1.
  
     0.665
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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