STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0189Putative iron-binding protein; Identified by similarity to GB:AAD03802.1; match to protein family HMM PF01547. (346 aa)    
Predicted Functional Partners:
ECH_0972
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.994
ECH_0845
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
 
 
 0.962
ECH_0067
Cation diffusion facilitator transporter family protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297.
     
 0.643
ECH_0665
Phage uncharacterized protein; Identified by match to protein family HMM TIGR01630.
      
 0.640
ECH_0838
Conserved hypothetical protein; Identified by similarity to GB:AAS13819.1; match to protein family HMM PF07690.
  
  
 0.628
ECH_0190
Hypothetical protein; Identified by Glimmer2; putative.
       0.623
ECH_0660
Conserved hypothetical protein; Identified by similarity to GB:AAS13837.1; match to protein family HMM TIGR02215.
      
 0.564
ECH_0662
Conserved hypothetical protein; Identified by similarity to GB:AAS13839.1.
      
 0.561
ECH_0663
Conserved hypothetical protein; Identified by similarity to GB:AAS13840.1.
      
 0.561
ECH_0664
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.561
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.