STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0213Putative oxidoreductase; Identified by match to protein family HMM PF04800. (104 aa)    
Predicted Functional Partners:
ECH_0754
O-methyltransferase; Identified by match to protein family HMM PF01596.
  
  
 0.715
ECH_0184
Identified by match to protein family HMM PF05071.
  
    0.705
nuoG
NADH dehydrogenase I, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
    0.606
ECH_0214
Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
    0.600
ECH_0725
Conserved hypothetical protein; Identified by similarity to GB:AAK22816.1.
  
     0.492
cycM
Cytochrome C, membrane-bound; Identified by similarity to SP:P30323; match to protein family HMM PF00034.
  
     0.473
ECH_0762
Conserved hypothetical protein; Identified by similarity to GB:AAS14410.1; match to protein family HMM PF02636.
  
     0.466
ECH_0326
Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
  
     0.458
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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