STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0482Putative lipoprotein. (324 aa)    
Predicted Functional Partners:
ECH_1013
Identified by match to protein family HMM PF00717; match to protein family HMM PF01381.
 
    0.789
ECH_0176
Conserved hypothetical protein; Identified by similarity to GB:AAS14671.1.
  
     0.774
virB6
Type IV secretion system protein VirB6; Identified by similarity to GB:AAM00403.1; match to protein family HMM PF04610.
  
     0.774
ECH_0497
Type IV secretion system protein, VirB6 family; Identified by similarity to GB:AAM00403.1; match to protein family HMM PF04610.
  
     0.774
ECH_0499
Type IV secretion system protein,VirB6 family; Identified by match to protein family HMM PF04610.
  
     0.774
ECH_0498
Type IV secretion system protein,VirB6 family; Identified by match to protein family HMM PF04610.
  
     0.773
ECH_0795
Conserved hypothetical protein; Identified by similarity to GB:AAS14946.1.
  
     0.771
ECH_0264
Conserved hypothetical protein; Identified by similarity to GB:AAS14039.1.
  
     0.769
ECH_0057
Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098.
  
     0.758
ECH_1079
Putative cytochrome c oxidase, subunit I.
  
     0.755
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.