Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ECH_0202 | ECH_0230 | ECH_0202 | ECH_0230 | NifU domain protein; Identified by match to protein family HMM PF01106. | Putative membrane protein; Identified by match to protein family HMM PF07690. | 0.550 |
| ECH_0202 | lipA | ECH_0202 | ECH_0490 | NifU domain protein; Identified by match to protein family HMM PF01106. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.560 |
| ECH_0230 | ECH_0202 | ECH_0230 | ECH_0202 | Putative membrane protein; Identified by match to protein family HMM PF07690. | NifU domain protein; Identified by match to protein family HMM PF01106. | 0.550 |
| ECH_0230 | ECH_0778 | ECH_0230 | ECH_0778 | Putative membrane protein; Identified by match to protein family HMM PF07690. | Conserved hypothetical protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00175. | 0.498 |
| ECH_0230 | guaA | ECH_0230 | ECH_0123 | Putative membrane protein; Identified by match to protein family HMM PF07690. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.590 |
| ECH_0230 | lipA | ECH_0230 | ECH_0490 | Putative membrane protein; Identified by match to protein family HMM PF07690. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.564 |
| ECH_0778 | ECH_0230 | ECH_0778 | ECH_0230 | Conserved hypothetical protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00175. | Putative membrane protein; Identified by match to protein family HMM PF07690. | 0.498 |
| ECH_0778 | lipA | ECH_0778 | ECH_0490 | Conserved hypothetical protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00175. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.446 |
| guaA | ECH_0230 | ECH_0123 | ECH_0230 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Putative membrane protein; Identified by match to protein family HMM PF07690. | 0.590 |
| guaA | lipA | ECH_0123 | ECH_0490 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.548 |
| guaA | nrdA | ECH_0123 | ECH_0459 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.677 |
| guaA | obg | ECH_0123 | ECH_0543 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | GTP-binding protein, GTP1/Obg family; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.526 |
| guaA | polA | ECH_0123 | ECH_0080 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.721 |
| guaA | tkt | ECH_0123 | ECH_0465 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.566 |
| lipA | ECH_0202 | ECH_0490 | ECH_0202 | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | NifU domain protein; Identified by match to protein family HMM PF01106. | 0.560 |
| lipA | ECH_0230 | ECH_0490 | ECH_0230 | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | Putative membrane protein; Identified by match to protein family HMM PF07690. | 0.564 |
| lipA | ECH_0778 | ECH_0490 | ECH_0778 | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | Conserved hypothetical protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00175. | 0.446 |
| lipA | guaA | ECH_0490 | ECH_0123 | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.548 |
| lipA | lipB | ECH_0490 | ECH_0371 | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.996 |
| lipA | nrdA | ECH_0490 | ECH_0459 | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.700 |
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