STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0709Conserved hypothetical protein; Identified by similarity to GB:AAS14116.1. (108 aa)    
Predicted Functional Partners:
ECH_0930
Putative bolA protein; Identified by similarity to SP:P15298; Belongs to the BolA/IbaG family.
 
     0.656
ECH_0907
Conserved hypothetical protein; Identified by similarity to GB:AAS14420.1.
  
     0.639
ECH_0307
Identified by match to protein family HMM PF02674.
  
     0.633
ECH_0710
Hypothetical protein; Identified by Glimmer2; putative.
       0.505
ECH_0335
Putative osmotically inducible protein; Identified by similarity to SP:P27291; match to protein family HMM PF04972.
  
     0.456
rpmE
Ribosomal protein L31; Identified by similarity to SP:Q8U9I5; Belongs to the bacterial ribosomal protein bL31 family.
  
     0.409
ECH_0343
Conserved hypothetical protein; Identified by similarity to PIR:F97652.
  
     0.406
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.