STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0767Conserved hypothetical protein; Identified by similarity to GB:AAL08817.1. (621 aa)    
Predicted Functional Partners:
ECH_0261
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.640
ECH_0825
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.640
virD4
Type IV secretion system protein VirD4; Identified by similarity to GB:AAM00416.1; match to protein family HMM PF02534.
      
 0.568
ECH_0389
Ankyrin repeat protein.
      
 0.567
ECH_0653
Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
      
 0.567
ECH_0877
Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
      
 0.567
ECH_0684
Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
      
 0.565
nrdB
Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
       0.464
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.