STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0773Putative response regulator/diguanylate cyclase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254. (458 aa)    
Predicted Functional Partners:
ECH_0885
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 0.999
ECH_0755
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 0.938
ECH_0771
Identified by match to protein family HMM PF05088.
      0.902
ECH_0772
Hypothetical protein; Identified by Glimmer2; putative.
       0.824
ECH_0943
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.629
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.580
ECH_0770
Hypothetical protein; Identified by Glimmer2; putative.
       0.557
ECH_0345
Conserved hypothetical protein; Identified by similarity to GB:AAS13843.1.
  
  
 0.494
ECH_0907
Conserved hypothetical protein; Identified by similarity to GB:AAS14420.1.
  
  
 0.450
ECH_1012
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
0.446
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.