STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0830Phage major capsid protein, HK97 family; Identified by similarity to SP:P49861; match to protein family HMM PF05065; match to protein family HMM TIGR01554. (383 aa)    
Predicted Functional Partners:
ECH_0032
Phage prohead protease, HK97 family; Identified by match to protein family HMM PF04586; match to protein family HMM TIGR01543.
  
 0.985
ECH_0033
Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.
 
 
 
 0.927
ECH_0660
Conserved hypothetical protein; Identified by similarity to GB:AAS13837.1; match to protein family HMM TIGR02215.
 
   0.901
ECH_0500
Conserved hypothetical protein; Identified by similarity to GB:AAS14953.1; match to protein family HMM TIGR02217.
 
 
   0.895
ECH_0835
Conserved hypothetical protein; Identified by similarity to GB:AAS14439.1; match to protein family HMM TIGR02218.
 
 
   0.895
ECH_0836
Conserved hypothetical protein; Identified by similarity to GB:AAS14108.1.
 
 
   0.894
ECH_0745
Conserved domain protein; Identified by similarity to GB:CAE27354.1.
 
 
   0.838
ECH_0193
Major facilitator family transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
   
    0.564
ECH_0829
Hypothetical protein; Identified by Glimmer2; putative.
       0.553
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
      
 0.520
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.