Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ECH_0846Conserved hypothetical protein; Identified by similarity to GB:BAA36355.1. (171 aa)    
Predicted Functional Partners:
ECH_1118
Putative transcriptional regulator; Identified by similarity to GB:AAC02808.2; match to protein family HMM PF01381.
  
     0.584
ECH_0264
Conserved hypothetical protein; Identified by similarity to GB:AAS14039.1.
  
     0.560
ECH_0057
Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098.
  
     0.540
ECH_0126
Conserved hypothetical protein; Identified by similarity to GB:AAS14093.1; match to protein family HMM PF06144; match to protein family HMM TIGR01128.
  
     0.534
ECH_0784
Putative N utilization substance protein B; Identified by similarity to GB:AAS13983.1.
  
     0.519
ECH_0129
HemY domain protein.
  
     0.497
ECH_0845
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
 
     0.486
rnpA
Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.464
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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