STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0874Disulfide bond formation family protein; Identified by match to protein family HMM PF02600. (157 aa)    
Predicted Functional Partners:
ECH_0873
Coq7 family protein; Belongs to the COQ7 family.
       0.827
ECH_0875
Putative phosphatidylglycerophosphatase A.
       0.823
ECH_0234
Conserved hypothetical protein; Identified by similarity to GB:AAS14712.1.
 
 
 0.688
ECH_0232
Tim44-like domain protein; Identified by similarity to GB:AAS13862.1; match to protein family HMM PF04280.
  
     0.682
ECH_0293
Disulfide oxidoreductase; Identified by similarity to GB:AAM22615.1; match to protein family HMM PF01323.
 
 
 0.669
recO
Putative DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.648
ECH_0126
Conserved hypothetical protein; Identified by similarity to GB:AAS14093.1; match to protein family HMM PF06144; match to protein family HMM TIGR01128.
  
     0.601
ECH_0199
Conserved hypothetical protein; Identified by similarity to PIR:G97712; match to protein family HMM PF06242.
  
     0.580
ECH_0820
Conserved hypothetical protein; Identified by similarity to GB:AAS14586.1.
 
     0.565
ECH_0343
Conserved hypothetical protein; Identified by similarity to PIR:F97652.
  
     0.522
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.