STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0907Conserved hypothetical protein; Identified by similarity to GB:AAS14420.1. (381 aa)    
Predicted Functional Partners:
ECH_0343
Conserved hypothetical protein; Identified by similarity to PIR:F97652.
  
   0.810
ECH_0820
Conserved hypothetical protein; Identified by similarity to GB:AAS14586.1.
 
     0.769
ECH_0885
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 0.728
hemD
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.694
ECH_0337
Putative cell division protein FtsQ; Essential cell division protein.
  
    0.691
ECH_0264
Conserved hypothetical protein; Identified by similarity to GB:AAS14039.1.
 
     0.684
ECH_0176
Conserved hypothetical protein; Identified by similarity to GB:AAS14671.1.
  
    0.683
ECH_0129
HemY domain protein.
  
     0.665
ECH_0755
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 
 0.652
ECH_0347
Peptidase, M48 family; Identified by match to protein family HMM PF01435.
  
     0.639
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.