STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH_0930Putative bolA protein; Identified by similarity to SP:P15298; Belongs to the BolA/IbaG family. (96 aa)    
Predicted Functional Partners:
ECH_0302
Identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 
 0.891
ECH_0706
Conserved hypothetical protein; Identified by similarity to GB:AAS14116.1.
 
     0.656
ECH_0709
Conserved hypothetical protein; Identified by similarity to GB:AAS14116.1.
 
     0.656
ECH_0713
Conserved hypothetical protein; Identified by similarity to GB:AAS14116.1.
 
     0.656
ECH_0929
Putative lipoprotein.
       0.515
ECH_0935
Identified by match to protein family HMM PF02230.
 
     0.422
ECH_0129
HemY domain protein.
  
     0.415
Your Current Organism:
Ehrlichia chaffeensis
NCBI taxonomy Id: 205920
Other names: E. chaffeensis str. Arkansas, Ehrlichia chaffeensis Arkansas, Ehrlichia chaffeensis str. Arkansas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.