STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001662245_00942Unannotated protein. (426 aa)    
Predicted Functional Partners:
GCA_001662245_00940
Unannotated protein.
       0.794
GCA_001662245_00941
Unannotated protein.
       0.794
GCA_001662245_02811
Unannotated protein.
 
 
   0.643
GCA_001662245_00671
Unannotated protein.
  
  
 0.609
GCA_001662245_03794
Unannotated protein.
 
     0.571
GCA_001662245_03584
Unannotated protein.
  
     0.570
GCA_001662245_01211
Unannotated protein.
  
    0.551
GCA_001662245_00621
Unannotated protein.
       0.548
GCA_001662245_03012
Unannotated protein.
       0.548
GCA_001662245_00709
Unannotated protein.
  
     0.508
Your Current Organism:
Pseudoalteromonas mariniglutinosa
NCBI taxonomy Id: 206042
Other names: DSM 15203, KMM 3635, P. mariniglutinosa, Pseudoalteromonas sp. ASW1, Pseudoalteromonas sp. KMM 3635, Pseudomonas marinoglutinosa
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.