STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX51_04957Uncharacterized protein. (357 aa)    
Predicted Functional Partners:
GX51_07949
Nuclear pore complex protein Nup93.
    
 0.968
GX51_05628
Nuclear pore complex protein Nup62.
   
 0.968
GX51_05290
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.968
GX51_03813
Uncharacterized protein.
   
 0.967
GX51_07997
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.965
GX51_05566
Nuclear pore complex protein.
    
 0.965
GX51_05958
Uncharacterized protein.
    
 0.963
GX51_04848
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.956
GX51_06002
Nuclear pore complex protein Nup54.
    
 0.955
GX51_03855
mRNA export factor.
    
 0.944
Your Current Organism:
Blastomyces parvus
NCBI taxonomy Id: 2060905
Other names: B. parvus, Blastomyces parvus (Emmons & Ashburn) Y. Jiang, Sigler & de Hoog, 2018, Blastomyces sp. BGE-2017b, CBS 139881, Emmonsia parva, Emmonsia parva var. parva, Haplosporangium parvum, UAMH 130
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