STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX51_04027Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (775 aa)    
Predicted Functional Partners:
GX51_03542
Osomolarity two-component system, response regulator SKN7.
    
 0.962
GX51_07545
Histone H2B; Belongs to the histone H2B family.
    
 0.924
GX51_03629
Histone acetyltransferase type B subunit 2.
   
 0.922
GX51_07544
Histone H2A; Belongs to the histone H2A family.
    
 0.909
GX51_05622
Histone deacetylase RPD3.
  
 
0.900
GX51_02360
Protein GZF3.
    
 0.887
GX51_06711
Mortality factor 4-like protein 1.
    
 0.881
GX51_06643
Cell division control protein 48; Belongs to the AAA ATPase family.
   
 0.868
GX51_08245
Uncharacterized protein.
    
 0.857
GX51_05888
Uncharacterized protein.
    
 0.822
Your Current Organism:
Blastomyces parvus
NCBI taxonomy Id: 2060905
Other names: B. parvus, Blastomyces parvus (Emmons & Ashburn) Y. Jiang, Sigler & de Hoog, 2018, Blastomyces sp. BGE-2017b, CBS 139881, Emmonsia parva, Emmonsia parva var. parva, Haplosporangium parvum, UAMH 130
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