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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIQ66380.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)    
Predicted Functional Partners:
KIQ66378.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
KIQ66376.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
KIQ66379.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.978
KIQ66377.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.968
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
   0.845
KIQ66363.1
Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.755
KIQ66364.1
Hydrogenase expression protein HypE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.650
KIQ66356.1
Hydrogenase maturation protein HypF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.646
KIQ65404.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.603
KIQ65709.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.603
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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