STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIQ66489.1Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)    
Predicted Functional Partners:
KIQ62802.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.936
KIQ64396.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.935
KIQ67316.1
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.923
KIQ66270.1
Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.920
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.587
KIQ67198.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.524
KIQ64487.1
CopY family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.524
KIQ64937.1
CopY family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.524
KIQ64024.1
CopY family transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.524
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.488
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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