Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KIQ65840.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1501 aa)    
Predicted Functional Partners:
KIQ63745.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KIQ66346.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
KIQ64552.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
KIQ65241.1
PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
KIQ66068.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
KIQ61880.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
KIQ64075.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
KIQ63241.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
KIQ63515.1
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
KIQ66309.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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