Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KIQ64406.1Globin; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
KIQ64516.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.904
KIQ65866.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.555
KIQ65840.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.518
KIQ62597.1
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.511
KIQ64407.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.469
KIQ67116.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.456
KIQ63584.1
PDZ/DHR/GLGF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.437
KIQ62128.1
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.415
KIQ63347.1
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.415
KIQ61520.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.407
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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