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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIQ66077.1TolB; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)    
Predicted Functional Partners:
KIQ63628.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.957
KIQ64512.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.804
KIQ64655.1
Surface antigen; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.635
KIQ67075.1
Chitosanase; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan.
  
  
  0.590
KIQ64769.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.590
KIQ63579.1
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
KIQ66473.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.560
KIQ66560.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.560
rny
Ribonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
  
   0.560
KIQ62032.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.560
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.