STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIQ62144.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)    
Predicted Functional Partners:
KIQ62145.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.846
KIQ62146.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.840
KIQ63948.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.735
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.701
KIQ67220.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.614
KIQ61520.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.614
KIQ61571.1
Oligo-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.614
KIQ61905.1
Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.614
KIQ61908.1
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
    
  0.614
KIQ63708.1
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.614
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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