STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIQ62460.1SWIM zinc finger domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)    
Predicted Functional Partners:
KIQ62461.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.970
KIQ62456.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.884
KIQ62457.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.884
KIQ62458.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
KIQ67257.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
KIQ62459.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.636
KIQ67256.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.526
KIQ66713.1
Tyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
sucC
succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
       0.455
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.