STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIQ64045.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)    
Predicted Functional Partners:
KIQ62789.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.892
KIQ66016.1
ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.817
KIQ62788.1
Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.694
KIQ63221.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.654
KIQ63667.1
Secreted/membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
KIQ62790.1
Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.619
KIQ63613.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.610
KIQ62066.1
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
KIQ63745.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.572
KIQ64288.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.