STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIQ62896.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)    
Predicted Functional Partners:
KIQ63628.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.947
KIQ64769.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.511
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
  0.493
rny
Ribonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
  
   0.483
KIQ66473.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
KIQ66560.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.479
KIQ64655.1
Surface antigen; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
KIQ62032.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
KIQ61645.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.469
KIQ61654.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.469
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.