Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KIQ63066.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
KIQ64105.1
Macrolide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.998
KIQ67161.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
KIQ65701.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.967
KIQ62327.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.850
KIQ67115.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.620
KIQ64391.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.620
KIQ65783.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.620
KIQ66804.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.593
KIQ65312.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.593
KIQ63330.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.555
Your Current Organism:
Kitasatospora griseola
NCBI taxonomy Id: 2064
Other names: DSM 43859, IFO 14371, JCM 3339, K. griseola, Kitasatospora sp. OM-5023, NBRC 14371, NRRL B-16229, Streptomyces griseolisporeus, Streptomyces griseolosporeus, VKM Ac-2002, strain AM-9660
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