STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF24504.1ATP synthase F0F1 subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATPase B chain family. (140 aa)    
Predicted Functional Partners:
AKF24505.1
ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
AKF24506.1
ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
AKF24507.1
ATP synthase F0F1 subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
AKF24508.1
ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
AKF24509.1
ATP synthase F0F1 subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
AKF24418.1
ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
AKF25214.1
ATP synthase F0F1 subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
atpF
ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
 
 
  0.984
AKF24916.1
Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AKF25976.1
Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
Your Current Organism:
Sulfurovum lithotrophicum
NCBI taxonomy Id: 206403
Other names: ATCC BAA-797, JCM 12117, S. lithotrophicum, Sulfurovum lithotrophicum Inagaki et al. 2004, epsilon proteobacterium 42BKT, strain 42BKT
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