STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF24932.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
AKF25756.1
Sulfur oxidation protein SoxYZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.711
AKF25445.1
Sulfur oxidation protein SoxB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.696
AKF25762.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
AKF25753.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
AKF25448.1
Sulfur oxidation protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.636
AKF25446.1
Cytochrome SoxA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.592
AKF25447.1
Sulfur oxidation protein SoxZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.592
AKF25438.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.532
AKF25440.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.532
AKF25442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.532
Your Current Organism:
Sulfurovum lithotrophicum
NCBI taxonomy Id: 206403
Other names: ATCC BAA-797, JCM 12117, S. lithotrophicum, Sulfurovum lithotrophicum Inagaki et al. 2004, epsilon proteobacterium 42BKT, strain 42BKT
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.