Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKO70488.1 | KKO72757.1 | AAV32_16335 | AAV32_05805 | Exported peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
KKO72756.1 | KKO72757.1 | AAV32_05800 | AAV32_05805 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.474 |
KKO72757.1 | KKO70488.1 | AAV32_05805 | AAV32_16335 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Exported peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
KKO72757.1 | KKO72756.1 | AAV32_05805 | AAV32_05800 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.474 |
KKO72757.1 | KKO72758.1 | AAV32_05805 | AAV32_05810 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
KKO72757.1 | KKO73204.1 | AAV32_05805 | AAV32_02645 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Permease; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.712 |
KKO72757.1 | mtgA | AAV32_05805 | AAV32_12720 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.502 |
KKO72758.1 | KKO72757.1 | AAV32_05810 | AAV32_05805 | FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
KKO73204.1 | KKO72757.1 | AAV32_02645 | AAV32_05805 | Permease; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.712 |
mtgA | KKO72757.1 | AAV32_12720 | AAV32_05805 | Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.502 |