Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKO71010.1 | KKO72061.1 | AAV32_13575 | AAV32_08740 | 2-aminomuconate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.506 |
KKO71010.1 | fusA | AAV32_13575 | AAV32_13160 | 2-aminomuconate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.416 |
KKO72020.1 | KKO72021.1 | AAV32_08735 | AAV32_08745 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.478 |
KKO72020.1 | KKO72061.1 | AAV32_08735 | AAV32_08740 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.732 |
KKO72021.1 | KKO72020.1 | AAV32_08745 | AAV32_08735 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.478 |
KKO72021.1 | KKO72061.1 | AAV32_08745 | AAV32_08740 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
KKO72061.1 | KKO71010.1 | AAV32_08740 | AAV32_13575 | Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-aminomuconate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.506 |
KKO72061.1 | KKO72020.1 | AAV32_08740 | AAV32_08735 | Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.732 |
KKO72061.1 | KKO72021.1 | AAV32_08740 | AAV32_08745 | Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
KKO72061.1 | fusA | AAV32_08740 | AAV32_13160 | Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.416 |
fusA | KKO71010.1 | AAV32_13160 | AAV32_13575 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 2-aminomuconate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.416 |
fusA | KKO72061.1 | AAV32_13160 | AAV32_08740 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.416 |