STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN24009.1Branched-chain amino acid transport system substrate-binding protein. (389 aa)    
Predicted Functional Partners:
SDN23970.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
  0.970
SDN24042.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.968
SDN24072.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.965
SDN24142.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
  0.957
SDN24106.1
Long-chain acyl-CoA synthetase.
 
    0.925
SDN23933.1
phenylacetate-CoA ligase.
 
    0.909
SDN24175.1
Acetoin utilization protein AcuB.
 
    0.762
SDN64457.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.674
SDN49655.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
  
 
0.652
SDN42059.1
phenylacetate-CoA ligase.
  
    0.641
Your Current Organism:
Desulfonauticus submarinus
NCBI taxonomy Id: 206665
Other names: CIP 107713, D. submarinus, DSM 15269, Desulfonauticus submarinus Audiffrin et al. 2003, strain 6N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.