STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN59221.1Coenzyme F420-reducing hydrogenase, alpha subunit. (460 aa)    
Predicted Functional Partners:
SDN59257.1
Coenzyme F420-reducing hydrogenase, gamma subunit.
 
 0.991
SDN59321.1
4Fe-4S dicluster domain-containing protein.
 
  
 0.984
SDN59291.1
NAD(P)H-flavin reductase.
 
  
 0.983
SDN55846.1
NADH-quinone oxidoreductase subunit F.
   
 0.975
SDN71558.1
Heterodisulfide reductase subunit A.
  
 
 0.963
SDN83746.1
Putative adenylylsulfate reductase-associated electron transfer protein QmoB.
  
 
 0.963
SDN55816.1
4Fe-4S dicluster domain-containing protein.
  
 0.961
SDN31597.1
F420-non-reducing hydrogenase subunit G.
 
 0.959
SDN70628.1
PAS domain S-box-containing protein.
 
  
  0.773
SDN87681.1
PAS domain S-box-containing protein.
 
  
  0.770
Your Current Organism:
Desulfonauticus submarinus
NCBI taxonomy Id: 206665
Other names: CIP 107713, D. submarinus, DSM 15269, Desulfonauticus submarinus Audiffrin et al. 2003, strain 6N
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