STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN55816.14Fe-4S dicluster domain-containing protein. (275 aa)    
Predicted Functional Partners:
SDN55846.1
NADH-quinone oxidoreductase subunit F.
 
 0.999
SDN55875.1
NADH-quinone oxidoreductase subunit E.
 0.999
SDN83746.1
Putative adenylylsulfate reductase-associated electron transfer protein QmoB.
 
 0.996
SDN31597.1
F420-non-reducing hydrogenase subunit G.
  
 0.993
SDN59257.1
Coenzyme F420-reducing hydrogenase, gamma subunit.
  
 0.993
SDN31664.1
Heterodisulfide reductase subunit B.
  
 0.983
SDN49714.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.983
SDO05884.1
Monomeric thiosulfate reductase apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.969
SDN85542.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
 
 
 0.964
SDN31561.1
F420-non-reducing hydrogenase subunit A.
  
 0.961
Your Current Organism:
Desulfonauticus submarinus
NCBI taxonomy Id: 206665
Other names: CIP 107713, D. submarinus, DSM 15269, Desulfonauticus submarinus Audiffrin et al. 2003, strain 6N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.