STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN91186.1Flavorubredoxin. (399 aa)    
Predicted Functional Partners:
SDN95659.1
Pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.956
SDN91285.1
Superoxide reductase.
 
  
 0.889
SDN49240.1
Hemerythrin-like metal-binding domain protein.
  
  
 0.783
SDN91224.1
Rubredoxin.
 
  
 0.730
SDN91256.1
Rubredoxin.
 
  
 0.721
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
  
 0.717
SDN91158.1
Hypothetical protein.
       0.671
SDN96124.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.648
SDN31373.1
PAS domain S-box-containing protein.
    
  0.596
SDN91126.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
       0.592
Your Current Organism:
Desulfonauticus submarinus
NCBI taxonomy Id: 206665
Other names: CIP 107713, D. submarinus, DSM 15269, Desulfonauticus submarinus Audiffrin et al. 2003, strain 6N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.